Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003867.1 Corchorus capsularis cultivar CVL-1 contig03875, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29175

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3045--3114
30
2.3
30
82
0
86
20
24
24
31
1.98
3061--3147
30
2.9
30
85
1
111
18
19
25
36
1.94
4638--4673
18
2.0
18
100
0
72
38
11
5
44
1.63
7328--7362
15
2.2
16
90
5
54
40
2
14
42
1.60
8523--8570
22
2.3
21
83
13
64
39
22
16
20
1.92
8546--8640
31
3.1
31
87
0
109
35
24
20
20
1.95
12655--12698
4
11.0
4
100
0
88
25
0
25
50
1.50
20277--20490
42
5.0
42
82
5
248
30
25
25
18
1.98
20968--21165
63
3.0
63
80
11
200
29
20
31
18
1.96
21012--21165
63
2.3
65
85
6
204
31
19
33
16
1.94
23816--23862
21
2.2
21
85
11
60
14
2
21
61
1.43
27239--27285
23
2.0
23
100
0
94
31
17
25
25
1.97
28996--29024
10
2.9
10
100
0
58
27
31
0
41
1.56

Tables:   1

The End!