Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003868.1 Corchorus capsularis cultivar CVL-1 contig03876, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25891

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--225
79
2.9
78
88
2
324
47
2
13
36
1.55
1617--1651
18
1.9
18
100
0
70
54
11
11
22
1.68
12719--12743
12
2.1
12
100
0
50
52
8
8
32
1.60
16964--17198
101
2.3
104
88
5
345
39
9
9
40
1.71
24869--24932
33
1.9
33
96
0
119
31
10
15
42
1.82
25677--25716
16
2.5
16
100
0
80
62
0
0
37
0.95

Tables:   1

The End!