Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003872.1 Corchorus capsularis cultivar CVL-1 contig03880, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7256

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
469--554
45
1.9
45
97
0
163
26
16
25
31
1.96
583--668
31
2.8
31
92
0
145
19
11
31
37
1.88
5876--5924
17
2.9
17
90
0
80
30
22
14
32
1.93
6343--6367
3
8.3
3
100
0
50
32
0
0
68
0.90
6344--6503
39
3.9
40
70
15
121
35
10
3
51
1.51
6440--6528
2
46.5
2
78
12
98
44
4
1
49
1.29

Tables:   1

The End!