Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003916.1 Corchorus capsularis cultivar CVL-1 contig03924, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26935

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2621--2762
53
2.7
53
84
0
194
36
17
14
30
1.90
4368--4431
22
2.9
22
81
9
76
15
21
37
25
1.93
5066--5113
15
2.9
17
78
12
64
18
27
14
39
1.90
6234--6281
15
2.9
17
81
12
64
20
25
12
41
1.87
6242--6295
15
2.9
19
74
25
62
18
24
14
42
1.88
7030--7104
29
2.6
29
78
2
69
37
10
4
48
1.57
8345--8378
18
1.9
18
94
5
61
67
8
11
11
1.42
12222--12267
16
2.9
16
86
0
65
34
34
15
15
1.89
12864--12996
16
8.4
16
78
1
126
37
35
16
10
1.83
12865--13007
48
3.0
48
82
4
166
37
34
16
11
1.85
17283--17346
23
2.8
24
73
17
66
46
0
18
34
1.49

Tables:   1

The End!