Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003946.1 Corchorus capsularis cultivar CVL-1 contig03954, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1009

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
393--623
56
4.2
56
91
3
362
48
8
19
24
1.76
393--628
113
2.1
112
89
4
336
48
8
19
24
1.75
617--824
26
7.8
26
79
15
228
56
7
18
17
1.63
647--825
13
13.5
13
65
21
79
56
6
20
16
1.62
616--826
53
3.9
53
91
2
341
56
7
18
17
1.62
616--826
107
2.0
108
92
2
354
56
7
18
17
1.62
905--980
27
2.8
28
73
15
86
53
3
22
19
1.61

Tables:   1

The End!