Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003953.1 Corchorus capsularis cultivar CVL-1 contig03961, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1567

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--55
22
2.3
23
87
9
74
41
13
11
33
1.80
23--172
45
3.4
44
76
6
124
45
8
12
33
1.73
22--147
22
5.7
22
77
7
121
43
8
14
33
1.76
188--585
22
18.8
21
69
17
177
39
9
16
34
1.81
254--302
19
2.5
19
90
3
71
46
12
16
24
1.81
461--567
23
4.7
23
83
2
119
39
10
14
35
1.81
593--620
2
14.0
2
100
0
56
50
0
0
50
1.00
808--845
3
12.7
3
100
0
76
31
0
0
68
0.90

Tables:   1

The End!