Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003963.1 Corchorus capsularis cultivar CVL-1 contig03971, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4255

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2018--2046
8
3.8
8
90
9
51
89
0
10
0
0.48
2018--2046
15
1.9
15
100
0
58
89
0
10
0
0.48
2108--2152
19
2.3
19
84
3
54
44
8
20
26
1.80
2140--2164
12
2.1
12
100
0
50
40
8
20
32
1.81
2121--2187
31
2.2
31
91
2
109
35
7
19
37
1.80
2214--2295
25
3.5
24
71
20
75
34
8
17
40
1.80
2626--2675
26
2.0
26
84
4
66
64
0
22
14
1.29
3274--3327
11
4.9
11
86
8
83
37
0
20
42
1.52
3273--3327
22
2.5
22
96
0
101
36
0
21
41
1.54
3284--3343
22
3.1
19
85
9
68
41
1
21
35
1.63

Tables:   1

The End!