Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003970.1 Corchorus capsularis cultivar CVL-1 contig03978, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10525

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
731--765
16
2.2
16
89
0
52
11
0
20
68
1.20
2939--2978
6
7.0
6
81
18
50
0
15
0
85
0.61
2942--2983
14
3.1
14
80
19
54
0
14
0
85
0.59
2942--2983
20
2.1
20
91
8
68
0
14
0
85
0.59
3707--3750
22
2.0
23
90
4
72
61
2
13
22
1.43
3817--3875
30
2.0
30
93
0
100
59
1
13
25
1.44
4047--4196
74
2.0
74
84
6
198
30
10
20
40
1.85
4304--4343
19
2.1
19
85
0
53
32
40
22
5
1.76
7932--7962
13
2.4
13
94
0
53
74
6
0
19
1.03

Tables:   1

The End!