Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003982.1 Corchorus capsularis cultivar CVL-1 contig03990, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2654

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1197--1227
15
2.1
15
93
0
53
19
16
0
64
1.29
1182--1254
24
2.9
24
79
6
56
19
20
1
58
1.46
1313--1363
25
2.0
25
92
0
84
25
19
0
54
1.44
1322--1428
42
2.5
42
82
8
121
24
27
2
45
1.67
1420--1455
15
2.6
14
87
12
56
19
22
5
52
1.66
1480--1518
20
2.0
20
89
0
60
20
23
5
51
1.67
1876--2182
39
8.0
38
88
3
427
28
13
6
51
1.65
1881--2182
77
3.9
77
95
1
509
29
13
6
51
1.65
2205--2339
55
2.5
53
75
11
137
24
17
6
51
1.70

Tables:   1

The End!