Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003992.1 Corchorus capsularis cultivar CVL-1 contig04000, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1295

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84--162
27
2.9
28
74
14
92
55
3
20
20
1.58
89--243
69
2.2
71
78
11
176
56
2
21
19
1.53
124--265
35
4.0
35
83
9
166
57
2
21
19
1.54
186--242
16
3.1
17
72
22
53
63
1
19
15
1.40

Tables:   1

The End!