Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004010.1 Corchorus capsularis cultivar CVL-1 contig04018, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32476

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7737--7869
60
2.2
60
85
5
171
33
16
19
30
1.94
8309--8348
20
2.1
18
90
9
62
20
5
12
62
1.48
9663--9697
13
2.6
13
90
4
52
8
2
14
74
1.17
23590--23633
19
2.3
19
84
7
54
13
52
2
31
1.53
24203--24263
21
2.9
21
75
4
61
34
9
16
39
1.82
27476--27513
2
19.5
2
89
5
60
0
50
0
50
1.00
30148--30286
62
2.2
63
92
1
226
21
18
17
42
1.89

Tables:   1

The End!