Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004012.1 Corchorus capsularis cultivar CVL-1 contig04020, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1014

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49--117
28
2.6
26
80
15
70
55
1
27
15
1.50
803--887
21
3.9
22
75
17
79
23
18
3
54
1.59
852--969
35
3.0
36
84
13
130
22
21
4
52
1.64
890--968
22
3.5
22
84
8
115
21
18
5
54
1.63
884--974
44
2.0
45
93
2
157
20
20
4
53
1.62

Tables:   1

The End!