Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004016.1 Corchorus capsularis cultivar CVL-1 contig04024, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13834

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4725--4802
32
2.4
32
93
4
131
28
17
16
37
1.92
8444--8503
19
3.5
19
67
30
53
28
23
8
40
1.83
8445--8517
33
2.2
32
85
2
92
28
21
8
41
1.82
10580--10617
2
18.5
2
94
5
67
47
2
0
50
1.15
11107--11144
18
2.1
18
90
0
58
36
28
18
15
1.92
11467--11754
150
1.9
151
92
0
488
34
8
3
53
1.49
11739--11768
14
2.1
14
100
0
60
23
13
6
56
1.60

Tables:   1

The End!