Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004017.1 Corchorus capsularis cultivar CVL-1 contig04025, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5510

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
466--529
20
3.4
19
74
12
69
15
35
20
28
1.93
453--541
37
2.4
37
86
0
124
15
38
20
25
1.92
1156--1272
27
4.4
27
75
7
78
22
25
26
25
2.00
1281--1408
27
4.8
26
75
7
105
24
24
30
21
1.99
1282--1380
27
3.7
27
78
8
121
23
26
30
20
1.98
1277--1407
53
2.4
54
82
5
176
23
25
29
22
1.99
2172--2240
24
2.8
25
80
6
97
37
30
14
17
1.90

Tables:   1

The End!