Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004035.1 Corchorus capsularis cultivar CVL-1 contig04043, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16652

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2410--2435
10
2.6
10
100
0
52
38
23
7
30
1.83
5927--6492
186
3.0
183
83
8
750
31
14
9
44
1.78
6560--7016
178
2.6
179
86
1
621
33
14
16
35
1.89
14879--14913
18
1.9
18
88
11
54
34
0
0
65
0.93
15426--15454
14
2.1
14
100
0
58
27
31
20
20
1.98
15826--15874
25
1.9
26
87
4
73
40
18
6
34
1.75

Tables:   1

The End!