Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004049.1 Corchorus capsularis cultivar CVL-1 contig04057, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5524

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
729--758
12
2.5
12
94
0
51
0
26
0
73
0.84
2808--2871
28
2.4
27
81
5
76
14
23
29
32
1.94
4432--4506
33
2.3
33
88
0
114
13
34
36
16
1.87
4531--4588
25
2.3
25
96
0
107
31
0
13
55
1.39
4547--4627
14
6.1
14
67
18
57
30
1
12
55
1.45
4981--5382
165
2.4
165
86
2
558
39
16
15
28
1.89

Tables:   1

The End!