Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000407.1 Corchorus capsularis cultivar CVL-1 contig00407, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24210

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1178--1233
3
18.0
3
92
7
94
32
0
0
67
0.91
3877--3915
6
6.5
6
93
0
60
12
15
66
5
1.41
17727--17772
7
6.6
7
92
0
74
13
41
2
43
1.55
17929--17957
15
1.9
15
100
0
58
20
0
41
37
1.53
17930--17963
15
2.3
15
89
0
50
23
2
44
29
1.68
18251--18284
17
2.0
17
88
11
52
55
17
0
26
1.42

Tables:   1

The End!