Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004083.1 Corchorus capsularis cultivar CVL-1 contig04091, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1710

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1232--1418
56
3.5
55
72
16
151
19
20
4
55
1.59
1252--1364
49
2.3
48
79
8
120
19
21
2
56
1.54
1281--1314
13
2.5
14
95
4
61
14
23
0
61
1.33
1280--1349
13
5.6
13
71
20
51
17
25
1
55
1.50
1486--1700
55
3.9
55
89
6
328
17
18
6
57
1.61
1487--1699
81
2.6
80
79
16
238
17
18
7
57
1.62
1486--1704
28
8.0
27
77
15
218
17
18
6
57
1.61

Tables:   1

The End!