Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000410.1 Corchorus capsularis cultivar CVL-1 contig00410, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8340

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
293--374
42
2.0
42
90
0
128
36
17
9
36
1.82
600--657
16
3.6
16
73
13
57
25
36
25
12
1.91
615--750
16
8.6
16
74
8
107
31
34
22
11
1.89
1379--1451
33
2.2
33
92
0
119
23
13
21
41
1.89
3352--3681
164
2.0
165
94
1
583
37
12
13
36
1.84

Tables:   1

The End!