Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004123.1 Corchorus capsularis cultivar CVL-1 contig04131, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7074

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1211--1268
29
2.0
29
86
3
80
36
27
12
24
1.91
2201--2401
22
9.2
21
71
8
125
41
11
12
33
1.80
2210--2401
44
4.4
44
74
5
147
41
11
12
34
1.80
2193--2354
66
2.5
67
78
8
154
42
12
11
32
1.80
2544--2685
22
6.5
22
76
6
128
36
11
11
39
1.79
2607--2778
44
3.8
44
75
6
146
36
11
13
38
1.81
2533--2738
22
9.2
22
69
15
102
34
12
14
38
1.83
2701--2758
22
2.6
22
76
15
57
37
6
10
44
1.65
3619--3653
16
2.2
16
94
0
61
45
11
0
42
1.40
5971--6007
18
2.1
18
94
0
65
29
10
27
32
1.90

Tables:   1

The End!