Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004151.1 Corchorus capsularis cultivar CVL-1 contig04159, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1085

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25--62
19
2.0
20
85
15
53
28
5
2
63
1.30
228--411
22
8.3
22
72
13
117
34
9
17
38
1.83
229--411
44
4.1
43
78
9
163
34
9
17
37
1.83
447--564
22
5.4
21
75
14
98
37
8
19
34
1.82
451--564
44
2.6
42
79
9
120
37
8
20
33
1.83
599--686
21
4.0
21
75
16
63
43
11
13
31
1.80
671--840
22
7.8
21
77
7
83
43
9
12
34
1.75
921--1083
22
7.5
21
70
11
89
41
9
15
33
1.80

Tables:   1

The End!