Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004160.1 Corchorus capsularis cultivar CVL-1 contig04168, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9944

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2200--2236
14
2.6
14
91
8
58
0
10
0
89
0.49
4087--4130
23
1.9
23
85
0
61
50
4
6
38
1.50
4226--4476
78
3.2
78
88
3
324
50
0
12
36
1.46
4925--4965
21
2.0
21
85
0
55
26
21
17
34
1.95
9620--9650
2
15.5
2
93
0
53
54
0
0
45
0.99
9620--9653
12
2.8
12
95
0
59
55
0
0
44
0.99

Tables:   1

The End!