Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000417.1 Corchorus capsularis cultivar CVL-1 contig00417, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13210

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1891--2015
25
5.6
21
67
20
76
48
0
0
51
1.06
1950--2009
13
5.3
11
74
18
52
48
0
0
51
1.00
2488--2525
11
3.5
11
85
10
51
57
2
0
39
1.12
2742--2776
16
2.2
16
89
0
52
14
25
5
54
1.62
2837--2894
27
2.1
27
81
6
64
31
12
5
51
1.61
6989--7019
14
2.2
14
100
0
62
70
6
6
16
1.29
7883--7935
28
1.9
27
96
3
97
41
13
11
33
1.80

Tables:   1

The End!