Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004183.1 Corchorus capsularis cultivar CVL-1 contig04191, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2346

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23--126
22
4.9
20
71
18
61
33
9
9
47
1.69
44--349
22
13.7
23
70
13
112
34
16
10
39
1.82
439--544
44
2.4
44
95
0
185
33
15
15
36
1.88
438--591
22
7.0
21
78
8
137
35
17
11
35
1.86
438--589
44
3.5
43
86
4
171
34
17
11
36
1.86
755--792
20
1.9
19
85
15
51
63
0
5
31
1.17
2029--2076
21
2.3
21
89
3
71
37
4
2
56
1.30
2043--2187
75
1.9
75
98
1
283
28
10
6
53
1.60

Tables:   1

The End!