Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004251.1 Corchorus capsularis cultivar CVL-1 contig04259, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7612

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
554--582
2
14.5
2
100
0
58
51
48
0
0
1.00
582--614
2
16.5
2
100
0
66
51
0
0
48
1.00
1364--1732
184
2.0
187
96
1
690
40
12
11
36
1.78
4505--4594
46
2.0
46
90
0
144
21
11
23
44
1.84
5752--5815
16
4.2
15
82
4
67
14
10
0
75
1.06
5753--5815
14
4.2
15
76
9
58
14
11
0
74
1.07
6542--6584
13
3.2
13
74
6
50
58
6
23
11
1.57
7156--7184
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!