Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004334.1 Corchorus capsularis cultivar CVL-1 contig04342, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8999

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--30
2
15.5
2
93
6
53
50
0
0
50
1.00
1765--1811
10
5.1
9
78
14
51
80
0
19
0
0.70
1766--1810
12
3.5
12
82
14
54
84
0
15
0
0.62
1766--1810
14
3.1
14
81
15
56
84
0
15
0
0.62
1765--1808
17
2.8
17
83
13
58
81
0
18
0
0.68
2715--2804
45
2.0
46
93
2
155
36
18
18
25
1.94
6017--6051
16
2.2
16
100
0
70
45
5
25
22
1.74
8284--8369
45
1.9
45
92
0
145
33
19
20
25
1.97
8917--8999
2
43.0
2
72
15
59
54
0
3
42
1.18
8919--8956
15
2.5
15
100
0
76
60
0
0
39
0.97

Tables:   1

The End!