Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004389.1 Corchorus capsularis cultivar CVL-1 contig04397, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1211

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
153--224
11
5.4
15
66
25
54
31
1
12
54
1.47
157--224
26
2.6
26
95
0
118
33
1
11
52
1.47
234--292
25
2.4
25
91
5
95
40
0
23
35
1.55
363--406
21
2.1
21
91
0
70
31
9
40
18
1.81
1093--1122
15
2.0
15
93
0
51
43
26
10
20
1.83

Tables:   1

The End!