Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004397.1 Corchorus capsularis cultivar CVL-1 contig04405, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1097

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
87--153
19
3.5
19
85
2
71
44
10
17
26
1.81
144--617
22
21.7
22
66
16
128
38
9
14
37
1.78
144--283
66
2.1
66
81
5
158
41
9
12
36
1.76
144--351
44
4.9
43
72
12
153
41
9
12
36
1.75
313--397
23
3.7
23
79
4
84
42
5
12
38
1.68
488--573
45
1.9
45
83
4
111
33
11
16
38
1.85

Tables:   1

The End!