Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004439.1 Corchorus capsularis cultivar CVL-1 contig04447, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1002

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
624--700
38
2.0
38
100
0
154
24
5
20
49
1.69
718--777
12
4.6
14
85
12
58
46
15
1
36
1.55
739--775
12
3.1
12
100
0
74
43
16
0
40
1.48
831--859
14
2.1
14
100
0
58
48
13
0
37
1.43
838--894
23
2.4
24
91
5
82
49
10
0
40
1.37
847--894
23
2.1
23
100
0
96
54
8
0
37
1.31
894--964
14
5.1
14
78
13
67
64
0
11
23
1.25
911--964
26
2.1
25
89
3
81
66
0
11
22
1.22
920--958
19
2.1
19
90
9
62
64
0
12
23
1.28

Tables:   1

The End!