Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004447.1 Corchorus capsularis cultivar CVL-1 contig04455, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1247

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
181--216
18
2.0
18
100
0
72
16
11
11
61
1.57
228--317
45
2.0
45
97
0
171
22
23
13
41
1.89
788--825
10
4.0
10
80
13
53
55
0
0
44
0.99
787--834
18
2.7
18
87
3
71
56
0
0
43
0.99
826--858
16
2.1
16
94
5
59
54
6
6
33
1.50

Tables:   1

The End!