Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000452.1 Corchorus capsularis cultivar CVL-1 contig00452, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5240

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2261--2365
16
6.6
14
75
17
57
30
36
21
11
1.89
2245--2382
32
4.3
31
83
6
150
31
35
23
9
1.87
2276--2382
48
2.2
48
80
12
139
32
35
21
10
1.87
2276--2380
16
6.6
16
80
4
122
32
36
20
10
1.87
3189--3233
16
2.9
15
84
12
56
31
42
22
4
1.73
3206--3352
16
9.2
16
77
5
138
35
35
19
9
1.85

Tables:   1

The End!