Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004610.1 Corchorus capsularis cultivar CVL-1 contig04622, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2402

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64--368
48
6.3
48
73
9
217
28
47
3
19
1.67
4--332
144
2.2
144
84
7
414
28
48
5
17
1.69
34--380
144
2.4
142
78
9
326
29
47
4
18
1.68
1730--1806
30
2.6
30
78
17
97
29
50
5
14
1.64
1729--2402
36
19.8
35
72
16
422
31
47
4
16
1.67
1716--2282
66
8.4
66
75
15
446
31
47
4
16
1.67
1711--2219
102
5.0
102
89
2
795
31
46
4
17
1.67
1762--2402
66
9.4
67
75
15
368
30
47
4
17
1.68
1729--2385
102
6.5
98
83
9
668
31
47
4
16
1.67
1978--2402
168
2.5
168
91
3
654
30
47
4
16
1.68

Tables:   1

The End!