Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004680.1 Corchorus capsularis cultivar CVL-1 contig04696, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1022

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
498--537
19
2.2
18
86
4
53
12
7
2
77
1.07
809--1010
30
6.0
30
74
20
170
28
9
8
53
1.62
812--890
15
5.3
15
68
0
68
29
8
7
54
1.59
869--979
40
2.8
39
94
2
195
27
9
9
54
1.61
789--1010
70
3.2
70
78
11
292
28
9
8
53
1.62
948--1010
31
2.0
31
93
6
110
28
9
7
53
1.61

Tables:   1

The End!