Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004695.1 Corchorus capsularis cultivar CVL-1 contig04711, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1028

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
305--417
48
2.4
48
89
5
183
19
19
23
37
1.94
354--507
77
2.0
77
85
2
211
20
24
19
35
1.96
726--816
32
2.8
32
91
6
157
10
30
29
28
1.91
804--860
26
2.2
26
100
0
114
15
24
33
26
1.95
807--853
13
3.6
13
78
21
62
14
27
31
25
1.95

Tables:   1

The End!