Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004724.1 Corchorus capsularis cultivar CVL-1 contig04740, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1401

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
542--654
48
2.4
48
89
5
183
19
19
23
37
1.94
591--745
77
2.0
78
84
3
206
20
24
19
35
1.96
964--1054
32
2.8
32
91
6
157
10
30
29
28
1.91
1042--1124
26
3.2
26
100
0
166
15
25
32
26
1.96
1045--1117
13
5.6
13
76
23
82
15
27
31
26
1.95
1019--1124
52
2.1
51
89
8
162
13
27
32
27
1.94

Tables:   1

The End!