Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004770.1 Corchorus capsularis cultivar CVL-1 contig04788, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11930

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1474--1540
31
2.2
31
86
5
93
40
19
17
22
1.92
5867--5914
12
4.0
12
89
10
71
22
33
0
43
1.54
5869--5914
24
1.9
24
95
0
83
21
32
0
45
1.52
7116--7172
29
1.9
29
85
3
78
28
15
12
43
1.83
8449--8493
21
2.1
21
87
4
63
44
0
0
55
0.99
8455--8491
18
2.1
18
89
0
56
43
0
0
56
0.99
11560--11603
21
2.1
21
83
8
54
18
31
9
40
1.81
11843--11916
33
2.3
33
90
2
114
21
41
25
10
1.85

Tables:   1

The End!