Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000479.1 Corchorus capsularis cultivar CVL-1 contig00479, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21712

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
400--434
16
2.1
17
89
5
54
54
5
17
22
1.64
4061--4244
93
2.0
93
95
0
332
24
21
28
25
1.99
9340--9398
16
3.7
16
93
0
91
35
42
15
6
1.73
9325--9414
32
2.8
32
76
1
101
31
47
16
4
1.66
9388--9420
10
3.1
11
86
8
50
24
54
21
0
1.45
10198--10224
10
2.7
10
100
0
54
48
33
11
7
1.67
11706--11933
121
1.9
121
88
3
352
46
23
11
18
1.81
12075--12144
29
2.3
29
85
9
97
48
2
10
38
1.51
15647--16141
47
10.7
47
84
5
603
39
9
12
38
1.75
15974--16050
26
3.2
26
64
21
76
41
9
11
37
1.73
15978--16052
25
3.2
25
62
27
63
41
9
12
37
1.74
15657--16179
135
3.8
140
80
8
432
40
9
12
37
1.76
16123--16311
41
4.4
41
81
9
182
37
16
14
32
1.89
16123--16351
41
5.4
41
80
9
167
35
15
15
33
1.90

Tables:   1

The End!