Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004807.1 Corchorus capsularis cultivar CVL-1 contig04825, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7241

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3493--3520
14
2.0
14
100
0
56
64
21
0
14
1.29
6024--6061
11
3.5
11
85
10
51
57
2
0
39
1.12
6278--6312
16
2.2
16
89
0
52
11
22
5
60
1.52
6366--6417
27
1.9
27
100
0
104
30
9
3
55
1.50
6373--6430
27
2.1
27
84
6
73
32
8
3
55
1.47
6528--6583
13
4.5
13
93
6
98
35
16
23
25
1.94
6528--6583
25
2.2
26
93
6
98
35
16
23
25
1.94

Tables:   1

The End!