Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004856.1 Corchorus capsularis cultivar CVL-1 contig04874, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6781

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
494--584
40
2.3
40
94
0
155
17
18
9
53
1.70
1855--1894
2
20.0
2
89
0
62
55
0
0
45
0.99
1854--1893
10
4.0
10
96
0
71
57
0
0
42
0.98
5394--5435
18
2.3
18
91
0
66
16
14
19
50
1.79
6153--6179
3
9.0
3
100
0
54
33
0
0
66
0.92
6590--6635
20
2.2
21
88
7
76
23
17
8
50
1.74

Tables:   1

The End!