Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004857.1 Corchorus capsularis cultivar CVL-1 contig04875, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10039

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
741--800
20
3.0
21
72
16
63
40
16
16
26
1.90
933--960
2
14.0
2
100
0
56
50
0
0
50
1.00
1511--1539
2
15.0
2
92
7
51
48
0
0
51
1.00
2597--2659
31
2.0
31
87
0
90
46
4
17
31
1.69
2823--2880
28
2.1
28
100
0
116
31
10
0
58
1.31
6718--6828
54
2.1
54
94
0
195
31
12
18
36
1.89
7540--7628
32
2.8
32
81
1
117
31
26
21
20
1.98

Tables:   1

The End!