Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004859.1 Corchorus capsularis cultivar CVL-1 contig04877, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7677

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
249--380
29
4.4
29
73
12
124
31
12
32
23
1.91
249--395
29
5.0
29
73
8
71
33
12
30
23
1.92
248--411
90
1.8
90
88
2
249
32
12
31
23
1.91
365--453
32
2.8
32
77
16
94
37
13
26
22
1.91
247--450
90
2.2
90
82
4
239
34
12
29
23
1.92

Tables:   1

The End!