Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004861.1 Corchorus capsularis cultivar CVL-1 contig04879, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8408

Tables:   1   

This is table  1  of  1  ( 3 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--37
2
18.5
2
100
0
74
51
0
0
48
1.00
3920--3961
21
2.0
21
85
0
57
4
38
21
35
1.75
8339--8388
21
2.3
22
83
13
68
32
12
12
44
1.78

Tables:   1

The End!