Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004870.1 Corchorus capsularis cultivar CVL-1 contig04888, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5846

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1743--1780
20
2.0
20
89
5
60
55
2
26
15
1.54
3332--3373
20
2.0
21
90
4
68
33
21
19
26
1.97
3784--3836
18
2.7
21
72
22
60
71
9
9
9
1.31
4183--4207
13
1.9
13
100
0
50
56
32
4
8
1.47
5087--5111
13
1.9
13
100
0
50
56
32
4
8
1.47
5563--5597
2
17.5
2
88
11
54
48
0
2
48
1.16

Tables:   1

The End!