Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004881.1 Corchorus capsularis cultivar CVL-1 contig04899, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38595

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
815--844
16
1.9
15
93
6
51
0
6
0
93
0.35
9289--9359
24
3.0
24
69
8
72
43
2
40
12
1.57
9265--9359
48
2.0
48
100
0
190
43
4
40
12
1.62
19455--19576
57
2.1
57
98
0
235
27
22
24
25
2.00
32273--32389
57
2.1
57
95
0
207
33
9
17
40
1.81
33177--33269
46
2.0
46
100
0
186
33
23
15
27
1.95
34484--34517
15
2.3
15
100
0
68
38
0
20
41
1.53
35939--35969
16
1.9
16
93
0
53
41
16
6
35
1.74

Tables:   1

The End!