Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004882.1 Corchorus capsularis cultivar CVL-1 contig04900, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7106

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75--136
22
2.9
21
69
4
61
22
11
25
40
1.87
1117--1200
33
2.5
33
84
7
116
16
42
29
10
1.82
1315--1411
33
2.9
32
73
14
90
11
31
39
17
1.85
1890--1926
19
1.9
19
94
0
65
16
24
2
56
1.53
3232--3384
73
2.1
70
79
12
173
49
0
11
38
1.44
3249--3410
73
2.3
70
81
10
195
52
1
11
35
1.45
3368--3524
39
4.2
39
69
25
126
56
1
8
34
1.38
3500--3532
8
4.1
8
96
0
57
72
3
0
24
0.98
3293--3631
117
2.9
117
93
4
568
53
1
9
35
1.41
3780--3812
11
3.1
11
91
4
50
90
9
0
0
0.44

Tables:   1

The End!