Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004890.1 Corchorus capsularis cultivar CVL-1 contig04908, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24539

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14--70
22
2.6
22
86
5
71
42
7
10
40
1.66
168--297
22
5.9
22
77
7
77
33
14
10
42
1.79
170--297
44
2.9
44
76
4
141
32
14
10
42
1.78
373--468
38
2.6
37
73
6
95
57
9
17
15
1.64
5860--6067
104
2.0
103
87
0
299
26
28
8
36
1.85
9725--9749
1
25.0
1
100
0
50
100
0
0
0
0.00
14933--15144
113
1.9
112
85
5
293
33
16
14
35
1.89
14933--15144
55
3.8
55
84
8
259
33
16
14
35
1.89

Tables:   1

The End!