Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004893.1 Corchorus capsularis cultivar CVL-1 contig04911, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11531

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5695--5745
25
2.1
24
85
3
66
60
11
7
19
1.55
9013--9124
47
2.4
46
77
7
118
16
29
20
33
1.94
9154--9309
40
3.8
40
82
13
190
14
23
21
40
1.90
9191--9407
46
4.8
46
79
10
211
13
25
21
39
1.90
9191--9403
92
2.4
89
84
8
254
13
25
21
39
1.90
9013--9444
220
2.0
221
84
6
574
14
25
21
38
1.91
9464--9774
48
6.4
48
80
3
329
21
28
16
33
1.95
9465--9774
97
3.2
97
86
2
392
21
29
16
32
1.95
9464--9774
145
2.1
144
82
3
365
21
28
16
33
1.95
10795--10862
34
2.0
34
85
0
91
29
22
14
33
1.94
11464--11497
9
3.8
9
92
7
52
79
0
2
17
0.86

Tables:   1

The End!