Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004905.1 Corchorus capsularis cultivar CVL-1 contig04923, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23376

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
694--769
16
4.8
16
70
3
55
9
10
36
43
1.71
709--768
31
1.9
31
89
0
93
8
8
38
45
1.65
1029--1067
12
3.6
12
80
19
50
25
28
15
30
1.96
3030--3084
12
4.5
12
93
4
92
27
23
14
34
1.94
3030--3084
25
2.2
24
93
3
92
27
23
14
34
1.94
3854--3898
18
2.5
18
85
0
54
17
31
4
46
1.68
11155--11197
17
2.6
17
85
7
54
34
2
9
53
1.46
20187--20245
2
30.0
2
86
3
84
50
0
5
44
1.24
22159--22209
22
2.2
24
80
16
63
41
1
0
56
1.10
22159--22207
25
2.0
25
84
8
64
40
2
0
57
1.10
22802--22828
10
2.7
10
100
0
54
0
18
40
40
1.51

Tables:   1

The End!