Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004909.1 Corchorus capsularis cultivar CVL-1 contig04927, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15236

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1388--1484
23
4.4
22
75
11
83
39
16
9
35
1.81
1387--1611
22
10.5
22
70
13
130
36
16
9
37
1.81
1781--1810
15
2.0
15
100
0
60
33
13
6
46
1.69
3536--3704
31
5.5
31
85
0
185
19
22
24
33
1.97
6453--6479
1
27.0
1
100
0
54
100
0
0
0
0.00
7630--7675
23
2.0
23
83
8
58
52
10
6
30
1.62
7947--7998
26
2.0
26
92
0
86
21
21
32
25
1.98

Tables:   1

The End!