Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004911.1 Corchorus capsularis cultivar CVL-1 contig04929, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40627

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3769--3795
2
13.5
2
100
0
54
51
0
0
48
1.00
5394--5419
13
2.0
13
100
0
52
30
30
7
30
1.85
8526--8562
19
1.9
19
94
0
65
21
0
18
59
1.38
18125--18157
8
4.2
8
84
7
50
84
3
12
0
0.72
18127--18155
15
1.9
15
100
0
58
82
3
13
0
0.79
25448--25510
31
2.0
31
100
0
126
39
9
6
44
1.62
25916--25946
16
1.9
16
93
0
53
41
6
9
41
1.63
27863--27915
27
1.9
28
88
11
83
33
15
13
37
1.86
33368--33396
12
2.5
12
94
5
51
6
13
0
79
0.93
40508--40568
30
2.0
30
87
0
86
52
8
27
11
1.66

Tables:   1

The End!